Software Tools

Internet Analysis Tools Registry - supported by the Human Brain Project
MATLAB , Image processing toolbox
SPM - Statistical Parametric Mapping. SPM2 , SPM5 (current version)
Group ICA of fMRI Toolbox (GIFT) - MATLAB toolbox which implements multiple algorithms for independent component analysis and blind source separation of group (and single subject) functional magnetic resonance imaging data and electro encephalogram data.
Analyze 8.1 Visualization and Analysis Software, AnalyzeDirect
BrainImage - Center for Interdisciplinary Brain Sciences Research, Stanford University
ImageJ - Image Processing and Analysis in Java
FSL - FMRIB Software Library, FMRIB Analysis Group , University of Oxford, UK
E-Prime - Psychology Software Tools
plink - Whole genome association analysis toolset