printer friendly page
Upstate Home
SUNY Upstate Medical university College of Graduate Studies

Faculty/Student Publications


Student Publications

Recent first-author publications in books and professional journals by Upstate students:

2008

  • Jason A. Horton et al. Ontogeny of skeletal maturation in the juvenile rat. The Anatomical Record 291(3):283-92 (2008).

2007

  • Melissa Andrews and D. Stelzner. Evaluation of olfactory ensheathing and schwann cells after implantation into a dorsal injury of adult rat spinal cord. J Neurotrauma. 11:1773-92 (2007).

  • Prabal Banerjee et al. Pro-inflammatory Cytokine Gene Induction by HTLV 1 and HTLV-2 Tax in Primary Human Glial Cells. Journal of Virology 81(4):1690-1700 (2007).

  • Prabal Banerjee et al. Human T-Cell Leukemia Virus Type 1 (HTLV-1) p12I Down-Modulates ICAM-1 and -2 and Reduces Adherence of Natural Killer Cells, Thereby Protecting HTLV-1-Infected Primary CD4+ T Cells from Autologous Natural Killer Cell-Mediated Cytotoxicity despite the Reduction of Major Histocompatibility Complex Class I Molecules on Infected Cells. Journal of Virology 81(18): 9707-9717 (2007).

  • Tania D. Banerjee et al. Environmental Risk Factors for Attention Deficit Hyperactivity Disorder. Acta Pediatrica 96:1269-1274 (2007).

  • Blaine T. Bettinger et al. Requirement for the polarisome and formin function in Ssk2p-mediated actin recovery from osmotic stress in Saccharomyces cerevisiae. Genetics 175(4):1637-48 (2007).

  • Marla B. Bruns and M.W. Miller. Neurotrophin ligand-receptor systems in somatosensory cortex of adult rat are affected by repeated episodes of ethanol. Exp Neurol. 204(2):680-92 (2007).

  • Marla B. Bruns and M.W. Miller. Functional nerve growth factor and trkA autocrine/paracrine circuits in adult rat cortex are revealed by episodic ethanol exposure and withdrawal. J Neurochem. 100(5):1155-68 (2007).

  • James S. Butler and S.N. Loh. Zn2+-dependent misfolding of the p53 DNA binding domain. Biochemistry 46(10):2630-9 (2007).

  • Michael G. Clark and D.C. Amberg. Biochemical and Genetic Analyses Provide Insight Into the Structural and Mechanistic Properties of Actin Filament Disassembly by the Aip1p Cofilin Complex in Saccharomyces cerevisiae. Genetics 176(3):1527-39 (2007).

  • Amanda C. Conta and D.J. Stelzner. Immunomodulatory effect of the purine nucleoside inosine following spinal cord contusion injury in rat. Spinal Cord Apr 3; [Epub ahead of print] PMID: 17406376

  • Thomas A. Cutler and S.N. Loh. Thermodynamic analysis of an antagonistic folding-unfolding equilibrium between two protein domains. J Mol Biol. 371(2):308-16 (2007).

  • Michelle E. Farah and D.C. Amberg. Conserved actin cysteine residues are oxidative stress sensors that can regulate cell death in yeast. Molecular Biology of the Cell 18(4):1359-65 (2007).

  • Christopher Griffith et al. An oncolytic mutant of herpes simplex virus type-1 in which replication is governed by a promoter/enhancer of human papillomavirus type-16. Cancer Gene Therapy, in press.

  • Changying Jiang et al. Mutations that decrease DNA binding of the processivity factor of the herpes simplex DNA polymerase reduce viral yield, alter the kinetics of viral DNA replication, and decrease fidelity of DNA replication. Journal of Virology 81(7):3495-502 (2007).

  • Changying Jiang et al. Herpes simplex virus mutants with multiple substitutions affecting DNA binding of UL42 are impaired for viral replication and DNA synthesis. Journal of Virology 81(21):12077-9 (2007).

  • Rosy Joshi-Mukherjee et al. Evidence for the presence of a free C-terminal fragment of Cx43 in cultured cells. Cell Communication and Adhesion 14:75-84 (2007).

  • Erik Kish-Trier et al. The Stator Complex of the A(1)A(0)-ATP Synthase-Structural Characterization of the E and H Subunits. J Mol Biol, in press [Epub ahead of print]

  • Viviana Munoz et al. Kir2.3 isoform confers pH sensitivity to heteromeric Kir2.1/Kir2.3 channels in HEK293 cells. Heart Rhythm 4(4):487-96 (2007).

  • Viviana Munoz et al. Adenoviral expression of IKs contributes to wavebreak and fibrillatory conduction in neonatal rat ventricular cardiomyocyte monolayers. Circulation Research 101(5):475-83 (2007).

  • Sami F. Noujaim et al. Up-regulation of the inward rectifier K+ current (IK1) in the mouse heart accelerates and stabilizes rotors. J Physiol 578(Pt1):315-26 (2007).

  • Adam Olia et al. Structure of Phage P22 Cell Envelope Penetrating Needle. Nature Structural and Molecular Biology, in press.

  • Adam Olia et al. Role of Gene 10 Protein in the Hierarchical Assembly of the Bacteriophage P22 Portal Vertex Structure. Biochemistry 46(30):8776-8784 (2007).

  • Eva M. Oxford et al. Molecular composition of the intercalated disc in a spontaneous canine animal model of arrhythmogenic right ventricular dysplasia/cardiomyopathy. Heart Rhythm, in press.

  • Margaret M.P. Pearce et al. SPFH2 mediates the endoplasmic reticulum-associated degradation of inositol 1,4,5-trisphosphate receptors and other substrates in mammalian cells. Journal of Biological Chemistry 282 [Epub ahead of print] (2007).

  • Karsten A. Pilones et al. Prenatal mercury exposure alter fetal cell phenotypes. Journal of Immunotoxicology, in press.

  • Rong Rong et al. Mitotic kinase Aurora-A phosphorylates RASSF1A and modulates RASSF1A-mediated microtubule interaction and M-phase cell cycle regulation. Oncogene 26(55):7700-8 (2007).

  • Matthew D. Soulsby and R.J. Wojcikiewicz. Calcium mobilization via type III inositol 1,4,5-trisphosphate receptors is not altered by PKA-mediated phosphorylation of serines 916, 934, and 1832. Cell Calcium (3):261-70 (2007).

  • David A. Tumbarello and C.E. Turner. Hic-5 contributes to epithelial-mesenchymal transformation through a RhoA/ROCK-dependent pathway. J. Cell Physiol 211:736-747 (2007).

  • Melinda J. Tyler and D.A. Cameron. Cellular pattern formation during retinal regeneration: A role for homotypic control of cell fate acquisition. Vision Research 47:501-511 (2007).

  • Jeffrey Ward et al. HIV modulates the expression of ligands important in triggering natural killer cell cytotoxic responses on infected primary T-cell blasts. Blood 110:1207-1214 (2007).

  • Patrick Yurco and D.A. Cameron. Cellular correlates of proneural and Notch-Delta gene expression in the regenerating zebrafish retina. Visual Neuroscience, in press.

  • Heidi J. Zapata et al. Varicella-zoster virus infection of human fibroblast cells activates the c-Jun N-terminal kinase pathway. Journal of Virology 81(2):977-90 (2007).

2006

  • Sarah A. Arrington et al. Temporal changes in bone mass and mechanical properties in a murine model of tumor osteolysis. Bone 38:359-67 (2006).

  • Boyd Butler et al. Purified integrin adhesion complexes exhibit actin-polymerization activity. Curr Biol. 16(3):242-51 (2006).

  • James S. Butler and S.N. Loh. Folding and misfolding mechanisms of the p53 DNA binding domain at physiological temperature. Protein Sci 15, 2457-2465 (2006).

  • Michael G. Clark et al. A genetic dissection of Aip1p's interactions leads to a model for Aip1p-Cofilin cooperative activities. Molecular Biology of the Cell 17(4):1971-84 (2006).

  • Chad A. Corcoran et al. The Regulation of Energy Generating Metabolic Pathways by p53. Cancer Biol Ther. 5(12), 2006 [Epub ahead of print]

  • Jacob G. Dubroff et al. Anomalous Functional Organization of Barrel Cortex in GAP-43 Mice. Neuroimage 29(4):1040-8 (2006).

  • David Fernandez et al. Rapamycin reduces disease activity and normalizes T cell activation-induced calcium fluxing in patients with systemic lupus erythematosus. Arthritis Rheum 54(9):2983-2988 (2006) [Epub]

  • Adam M. Gerber and M.L. Vallano. Structural properties of the NMDA receptor and the design of neuroprotective therapies. Mini-Rev Med Chem 6:805-815 (2006).

  • Jason A. Horton et al. Restoration of growth plate function following radiotherapy is driven by increased proliferative and synthetic activity of expansions of chondrocytic clones. Journal of Orthopaedic Research 24(10): 1945-1956 (2006).

  • Chad A. Hudson et al. Regulation of avoidant behaviors and pain by the anti-inflammatory tyrosine phosphatase SHP-1. Neuron Glia Biology 2:235-246, (2006).

  • Changying Jiang et al. Herpes simplex virus type 1 recombinants without the ori(L) sequence replicate DNA with increased fidelity. Virology 347(2):277-85(2006).

  • David P. LaLonde et al. CdGAP Associates with Actopaxin to Regulate Integrin-Dependent Changes in Cell Morphology and Motility. Curr Biol. 16(14):1375-85 (2006).

  • Stacey A. Leisenfelder and JF Moffat. Varicella-zoster virus infection of human foreskin fibroblast cells results in atypical cyclin expression and cyclin-dependent kinase activity. Journal of Virology, 80(11):5577-5587 (2006).

  • Michelle M. Mader and D.A. Cameron. Effects of induced systemic hypothyroidism upon the retina: Regulation of thyroid hormone receptor alpha and photoreceptor production. Molecular Vision 12:915-930. (2006).

  • Vera A. McIlvain and J.S. McCasland. GAP-43 Heterozygous Mice Show Delayed Barrel Patterning, Differentiation of Radial Glia, and Down-regulation of GAP-43. The Anatomical Record Part A 288A:143-157 (2006).

  • Stephen E. Mercer and Eileen Friedman. E. Mirk/Dyrk1B: A multifunctional dual-specificity kinase involved in growth control, differentiation and cell survival. Cell Biochem. and Biophys. 45:303-315 (2006).

  • Stephen E. Mercer et al. E. Mirk/Dyrk1B mediates survival in rhabdomyosarcoma. Cancer Res. 66:5143-5150 (2006).

  • Masashi Ohira et al. The E and G subunits of the yeast V-ATPase interact tightly and are both present at more than one copy per V1 complex. Journal of Biological Chemistry 281(32):22752-60 (2006).

  • Adam Olia et al. Binding-induced stabilization and assembly of the Phage P22 tail accessory factor GP4. Journal of Molecular Biology 363(2):558-76 (2006).

  • Junko Shibayama et al. Identification of a novel peptide that interferes with the chemical regulation of connexin43. Circulation Research 98:1365 1372 (2006).

  • Junko Shibayama et al. Effect of charge substitutions at residue his142 on voltage gating of connexin43 channels. Biophysical Journal 91:4054-4063 (2006).

  • Julie A. Siegenthaler and M.W. Miller. Ethanol alters neuronal migration. In: Miller, M.W. (ed.) Brain Development. Normal Processes and the Effects of Alcohol and Nicotine. Oxford Univ. Press, New York. pp. 216-229 (2006)

  • Rong Wu et al. Observing Nuclear Structure/Chromatin Changes With Fluorescently-Labelled Antibodies. Methods in Molecular Biology 325:139-148 (2006).

  • Rong Wu et al. Uncoupling Global and Fine-Tuning Replication Timing Determinants for Mouse Peri-Centric Heterochromatin. J. Cell Biol. 2006 (in press).

  • William Wu et al. KSHV/HHV-8 infection of human hematopoietic progenitor (CD34+) cells: persistence of infection during hematopoiesis in vitro and in vivo. Blood 108(1):141-51 (2006).

2005


v 1.0