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Publications

JOURNALS

Prickett KS, Amberg DC, Hopp TP (1989) A calcium dependent antibody for identification and purification of recombinant proteins, Biotechniques, 7, 580-589.

Amberg DC, Goldstein AL, Cole CN (1992) Isolation and characterization of RAT1: an essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA, Genes Devel., 6, 1173-1189.

Amberg DC, Fleischmann M, Stagljar I, Cole CN, Aebi M (1993) Nuclear PRP20 Protein is Required for mRNA Export, EMBO J., 12, 233-241.

Bogerd AM, Hoffman JA, Amberg DC, Fink G, Davis LI (1994) nup1 mutants exhibit pleitropic defects in nuclear pore complex function, J. Cell Biol., 127, 319-332.

Amberg DC, Basart E, Botstein D (1995) Defining Protein Interactions with Yeast Actin in vivo, Nature Structural Biology, 2, 28-35.

Li O, Heath CV, Amberg DC, Dockendorff TC, Copeland CS, Snyder M, Cole CN (1995), Mutation or deletion of the Saccharomyces cerevisiae RAT3/NUP133 gene causes temperature-dependent nuclear accumulation of poly(A)+ RNA and constitutive clustering of nuclear pore complexes, Mol. Biol. Cell, 6, 401-417.

Amberg DC, Botstein D, Beasley EM (1995) Precise gene disruption in Saccharomyces cerevisiae by double fusion polymerase chain reaction, Yeast, 11, 1275-1280.

Heath CV, Copeland CS, Amberg DC, Del Priore V, Snyder M, Cole CN (1995) Nuclear pore complex clustering and nuclear accumulation of poly(A)+ RNA associated with mutation of the Saccharomyces cerevisiae RAT2/NUP120 gene, J. Cell Biol., 131, 1677-97.

Saavedra C, Tung K-S, Amberg DC, Hopper AK and Cole CN (1996) Regulation of mRNA Export in Response to Stress in Saccharomyces cerevisiae, Genes and Devel., 10, 1608-20.

Amberg DC, Zahner JE, Mulholland JW, Pringle JR and Botstein D (1997) Aip3p/Bud6p, a yeast actin-interacting protein that is involved in morphogenesis and the selection of bipolar budding sites, Mol. Biol. Cell, 8, 729-753.

Amberg DC (1998) Three-dimensional imaging of the yeast actin-cytoskeleton through the budding cell-cycle, Molec. Biol. Cell, 8, 3259-62.

Rodal A, Tetreault J, Lappalainin P, Drubin DG, and Amberg DC (1999) Aip1p Interacts with Cofilin to diassemble Actin Filaments, J. Cell Biol., 145, 1251-64.

Jin H and Amberg DC (2000) The Secretory Pathway Mediates Localization of the Cell Polarity Regulator Aip3p/Bud6p. Molec. Biol. Cell, 11, 647-661.

Jin H and Amberg DC (2001) Fission yeast Aip3p (spAip3p) is required for an alternative actin-directed polarity program. Molec. Biol. Cell, 12, 1275-1291.

Evangelista M, Pruyne D, Amberg DC, Boone C, and Bretscher A. (2002) Formins direct Arp2/3-independent actin filament assembly to polarize cell growth in yeast. Nat Cell Biol, 4(3):260-9.

Yuzyuk T, Foehr M, and Amberg, DC (2002) The MEK kinase Ssk2p promotes actin cytoskeleton recovery after osmotic stress. Mol. Biol. Cell, 13, 2869-2880.

Yuzyuk T, Foehr M, and Amberg, DC (2003) Actin recovery and bud emergence in osmotically stressed cells requires the conserved actin interacting mitogen-activated protein kinase kinase kinase Ssk2p/MTK1 and the scaffold protein Spa2p. Mol. Biol. Cell 14(7):3013-26.

Bettinger BT, Gilbert DM, and Amberg DC (2004) Actin up in the nucleus. Nat Rev Mol Cell Biol. 5(5):410-5.

Clark MG, Temply J, Haarer BK, Viggiano SC, Sept D and Amberg D (2006) A genetic dissection of Aip1p's interactions leads to a model for Aip1p-cofilin cooperative activities. Molec. Biol. Cell, 17, 1971-1984.

Daniel JA, Yoo J, Bettinger BT, Amberg DC and Burke D. (2006) Eliminating gene conversion improves high-throughput genetics in Saccharomyces cerevisiae. Genetics, 172, 709-711.

Haarer BK, Helfant AH and Amberg D (2007) Stable pre-anaphase spindle positioning requires Bud6p/Aip3p and an apparent interaction between the spindle pole bodies and the neck. Euk. Cell, May; 6(5): 797-807. Epub 2007 Apr 6.

Farah ME and Amberg D (2007) Conserved actin cysteine residues are oxidative stress sensors that can regulate cell death in yeast. Molec. Biol. Cell, April 2007;18 (4): 359-1365.

Haarer BK,Viggiano SC, Hibbs MA, Troyanskaya OG and Amberg DC (2007) Modeling complex genetic interactions in a simple eukaryotic genome: Actin displays a rich spectrum of complex haploinsufficiencies. Genes and Devel., 21, 149-159. This article was featured on the cover and in a perspective published in the same issue.

Bettinger BT, Clark MG and Amberg DC (2007) Requirement for the polarisome and formin function in Ssk2p-mediated actin recovery form osmotic stress in Saccharomyces cerevisiae. Genetics, Apr; 175(4): 1637-48. Epub 2007 Jan 21.

Bettinger BT and Amberg DC (2007) The MEK kinases MEKK4/Ssk2p facilitate complexity in the stress signaling responses of diverse systems. J. Cell. Biochem., 2007 May 1; 101(1): 34-43

Clark MG and Amberg DC (2007) Biochemical and genetic analyses provide insight into the structural and mechanistic properties of actin filament disassembly by the Aip1p-cofilin complex in Saccharomyces cerevisiae. Genetics, 2007 May 4; [Epub ahead of print].

 

BOOKS

Amberg DC, Burke D and Strathern J. (2005) Methods in Yeast Genetics. Cold Spring Harbor Press.

 

BOOK CHAPTERS

Amberg DC and Botstein D (1996) Obtaining structural information about multi-protein complexes with the two-hybrid system. In "The Two-Hybrid System" (P.L. Bartel and S. Fields, eds.), pgs. 99-108, Oxford University Press, Oxford.

Botstein D, Amberg D, Mulholland J, Huffaker T, Adams A, Drubin D, and Stearns T (1997) The Yeast Cytoskeleton. In "The Molecular and Cellular Biology of the Yeast Saccharomyces: Cell Cycle and Cell Biology" (J.R. Pringle, J.R. Broach, and E.W. Jones, eds.), pgs. 1-90, Cold Spring Harbor Laboratory Press, Cold Spring Harbor.

Cole CN, Heath CV, Hodge CA, Hammell CM, and Amberg DC (2002) Analysis of RNA export, Methods in Enzymology, 351:568-87.

 

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